Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm8531-201ENSMUST00000188319 893 ntBASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm45165-201ENSMUST00000207763 1631 ntBASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm5766-201ENSMUST00000160520 1977 ntBASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm38292-201ENSMUST00000192646 3045 ntBASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 AC090962.2-201ENSMUST00000225064 1801 ntBASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm43522-201ENSMUST00000196697 1922 ntBASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Gm24398-201ENSMUST00000157870 109 ntBASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Gm23680-201ENSMUST00000083162 164 ntBASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Gm44415-201ENSMUST00000204151 2112 ntBASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.07□□□□□ -0.32
Usp44Q8C2S0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Snord23-201ENSMUST00000116828 109 ntBASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Gm6407-201ENSMUST00000176468 549 ntBASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Gm37301-201ENSMUST00000195412 568 ntBASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.06□□□□□ -0.32
Usp44Q8C2S0 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.06□□□□□ -0.32
Usp44Q8C2S0 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms