Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 AC135114.1-201ENSMUST00000228682 270 ntBASIC12□□□□□ -0.49
Trim65Q8BFW4 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trim65Q8BFW4 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12□□□□□ -0.49
Trim65Q8BFW4 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim65Q8BFW4 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim65Q8BFW4 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim65Q8BFW4 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim65Q8BFW4 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim65Q8BFW4 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12□□□□□ -0.49
Trim65Q8BFW4 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Gm10731-201ENSMUST00000181171 448 ntBASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.99□□□□□ -0.49
Trim65Q8BFW4 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Gm9132-201ENSMUST00000210182 832 ntBASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim65Q8BFW4 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Gm13422-201ENSMUST00000118834 504 ntBASIC11.98□□□□□ -0.49
Trim65Q8BFW4 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Gm22902-201ENSMUST00000158488 302 ntBASIC11.98□□□□□ -0.49
Trim65Q8BFW4 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Gm3551-201ENSMUST00000190750 664 ntBASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Gm37458-201ENSMUST00000194055 410 ntBASIC11.98□□□□□ -0.49
Trim65Q8BFW4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.98□□□□□ -0.49
Trim65Q8BFW4 Gm45398-201ENSMUST00000210561 165 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms