Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Gm45118-201ENSMUST00000208928 825 ntBASIC11.2□□□□□ -0.62
Rpp38Q80UU2 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.2□□□□□ -0.62
Rpp38Q80UU2 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpp38Q80UU2 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm13284-201ENSMUST00000121020 547 ntBASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm42997-202ENSMUST00000200321 985 ntBASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm8959-201ENSMUST00000213150 571 ntBASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.19□□□□□ -0.62
Rpp38Q80UU2 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm18165-201ENSMUST00000217426 928 ntBASIC11.19□□□□□ -0.62
Rpp38Q80UU2 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm25125-201ENSMUST00000083340 136 ntBASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.19□□□□□ -0.62
Rpp38Q80UU2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Rpp38Q80UU2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms