Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ift88Q61371 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Gm8731-201ENSMUST00000118088 412 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Gm15374-201ENSMUST00000119313 844 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Gm4482-201ENSMUST00000200876 742 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.37□□□□□ -0.43
Ift88Q61371 Gm5302-201ENSMUST00000202130 796 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.37□□□□□ -0.43
Ift88Q61371 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Gm9899-201ENSMUST00000065519 555 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ift88Q61371 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Olfr582-201ENSMUST00000098212 960 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ift88Q61371 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ift88Q61371 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Ift88Q61371 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.37□□□□□ -0.43
Ift88Q61371 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ift88Q61371 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.37□□□□□ -0.43
Ift88Q61371 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ift88Q61371 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ift88Q61371 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ift88Q61371 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.36□□□□□ -0.43
Ift88Q61371 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.36□□□□□ -0.43
Ift88Q61371 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ift88Q61371 Gm24891-201ENSMUST00000104391 136 ntBASIC12.36□□□□□ -0.43
Ift88Q61371 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Ift88Q61371 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.36□□□□□ -0.43
Ift88Q61371 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.36□□□□□ -0.43
Ift88Q61371 Gm12407-201ENSMUST00000180219 324 ntBASIC12.36□□□□□ -0.43
Ift88Q61371 Gm37597-201ENSMUST00000191853 382 ntBASIC12.36□□□□□ -0.43
Ift88Q61371 Gm43058-201ENSMUST00000197645 625 ntBASIC12.36□□□□□ -0.43
Ift88Q61371 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Gm45331-201ENSMUST00000209868 554 ntBASIC12.36□□□□□ -0.43
Ift88Q61371 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ift88Q61371 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ift88Q61371 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ift88Q61371 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ift88Q61371 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms