Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.8□□□□□ -0.68
ClpbQ60649 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
ClpbQ60649 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.8□□□□□ -0.68
ClpbQ60649 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.8□□□□□ -0.68
ClpbQ60649 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ClpbQ60649 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.8□□□□□ -0.68
ClpbQ60649 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
ClpbQ60649 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.79□□□□□ -0.68
ClpbQ60649 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.79□□□□□ -0.68
ClpbQ60649 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Btrc-209ENSMUST00000224478 2194 ntBASIC10.79□□□□□ -0.68
ClpbQ60649 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
ClpbQ60649 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.79□□□□□ -0.68
ClpbQ60649 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.79□□□□□ -0.68
ClpbQ60649 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.79□□□□□ -0.68
ClpbQ60649 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.79□□□□□ -0.68
ClpbQ60649 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.79□□□□□ -0.68
ClpbQ60649 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Gm9463-201ENSMUST00000206707 601 ntBASIC10.79□□□□□ -0.68
ClpbQ60649 Gm44545-201ENSMUST00000208262 746 ntBASIC10.79□□□□□ -0.68
ClpbQ60649 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.79□□□□□ -0.68
ClpbQ60649 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.79□□□□□ -0.68
ClpbQ60649 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.79□□□□□ -0.68
ClpbQ60649 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.79□□□□□ -0.68
ClpbQ60649 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
ClpbQ60649 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.79□□□□□ -0.68
ClpbQ60649 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
ClpbQ60649 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClpbQ60649 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
ClpbQ60649 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.78□□□□□ -0.68
ClpbQ60649 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.78□□□□□ -0.68
ClpbQ60649 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
ClpbQ60649 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.78□□□□□ -0.68
ClpbQ60649 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
ClpbQ60649 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.78□□□□□ -0.68
ClpbQ60649 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.78□□□□□ -0.68
ClpbQ60649 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm12247-201ENSMUST00000117585 670 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.78□□□□□ -0.68
ClpbQ60649 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.78□□□□□ -0.68
ClpbQ60649 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
ClpbQ60649 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm20495-201ENSMUST00000173902 235 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm23771-201ENSMUST00000178702 110 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Gm7741-201ENSMUST00000181445 989 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Gm27910-201ENSMUST00000185004 107 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Gm3551-201ENSMUST00000190750 664 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
ClpbQ60649 Gm44980-201ENSMUST00000205826 314 ntBASIC10.78□□□□□ -0.68
ClpbQ60649 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.78□□□□□ -0.68
ClpbQ60649 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.78□□□□□ -0.68
ClpbQ60649 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.78□□□□□ -0.68
ClpbQ60649 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
ClpbQ60649 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClpbQ60649 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms