Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Gm4917-201ENSMUST00000121452 650 ntBASIC13.43□□□□□ -0.26
Vps54Q5SPW0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Gm3726-201ENSMUST00000203110 785 ntBASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Gm3619-201ENSMUST00000219947 775 ntBASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps54Q5SPW0 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm14592-201ENSMUST00000117201 560 ntBASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm14270-201ENSMUST00000118388 846 ntBASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm12663-201ENSMUST00000118481 958 ntBASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm12986-201ENSMUST00000119037 967 ntBASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps54Q5SPW0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vps54Q5SPW0 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms