Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Mir705-201ENSMUST00000102058 82 ntBASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Gm27675-201ENSMUST00000184527 94 ntBASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Gm28671-201ENSMUST00000187036 692 ntBASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Gm44917-201ENSMUST00000208798 520 ntBASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Gm18041-201ENSMUST00000218210 618 ntBASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Gm7242-201ENSMUST00000221134 705 ntBASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 AC133496.1-201ENSMUST00000223891 743 ntBASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b2Q3UJB0 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Mir8111-201ENSMUST00000184463 137 ntBASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Gm18555-201ENSMUST00000197935 584 ntBASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Gm3926-201ENSMUST00000223378 1123 ntBASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Gm9701-201ENSMUST00000077976 427 ntBASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Gm25514-201ENSMUST00000083860 135 ntBASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sf3b2Q3UJB0 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Mir1190-201ENSMUST00000116925 96 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Gm5944-201ENSMUST00000118182 1001 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Gm23432-201ENSMUST00000157181 131 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Gm40332-201ENSMUST00000199847 938 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 AC132384.2-201ENSMUST00000218018 526 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 AC163638.2-201ENSMUST00000224920 827 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 AC133517.1-201ENSMUST00000225825 594 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Gm5424-201ENSMUST00000053865 1240 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Krtap6-3-201ENSMUST00000079151 444 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3b2Q3UJB0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms