Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.7□□□□□ -0.38
GabpaQ00422 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.7□□□□□ -0.38
GabpaQ00422 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
GabpaQ00422 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.7□□□□□ -0.38
GabpaQ00422 Gm5257-201ENSMUST00000121823 790 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Gm13981-201ENSMUST00000122360 447 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Gm9372-201ENSMUST00000168454 430 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Gm8451-201ENSMUST00000170338 447 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Gm20414-201ENSMUST00000172918 646 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.7□□□□□ -0.38
GabpaQ00422 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Gm31274-201ENSMUST00000197356 229 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Gm42660-201ENSMUST00000197733 947 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Gm7536-201ENSMUST00000077389 444 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Gm5453-201ENSMUST00000080866 447 ntBASIC12.7□□□□□ -0.38
GabpaQ00422 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GabpaQ00422 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GabpaQ00422 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
GabpaQ00422 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
GabpaQ00422 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.69□□□□□ -0.38
GabpaQ00422 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
GabpaQ00422 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.69□□□□□ -0.38
GabpaQ00422 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Gm23612-201ENSMUST00000103823 110 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
GabpaQ00422 Gm15196-201ENSMUST00000121406 482 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Gm11354-201ENSMUST00000121974 422 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.69□□□□□ -0.38
GabpaQ00422 Gm17221-201ENSMUST00000163909 481 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Gm17073-201ENSMUST00000168069 556 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Gm23576-201ENSMUST00000179918 110 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Gm20781-201ENSMUST00000193154 693 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Gm21736-201ENSMUST00000195399 693 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.69□□□□□ -0.38
GabpaQ00422 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
GabpaQ00422 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
GabpaQ00422 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.69□□□□□ -0.38
GabpaQ00422 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.69□□□□□ -0.38
GabpaQ00422 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GabpaQ00422 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms