Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.66□□□□□ -0.7
Nkx3-2P97503 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.66□□□□□ -0.7
Nkx3-2P97503 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.66□□□□□ -0.7
Nkx3-2P97503 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Gm23105-201ENSMUST00000083719 134 ntBASIC10.66□□□□□ -0.7
Nkx3-2P97503 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.66□□□□□ -0.7
Nkx3-2P97503 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.66□□□□□ -0.7
Nkx3-2P97503 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm37744-201ENSMUST00000194616 1590 ntBASIC10.65□□□□□ -0.7
Nkx3-2P97503 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.65□□□□□ -0.7
Nkx3-2P97503 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm15374-201ENSMUST00000119313 844 ntBASIC10.65□□□□□ -0.7
Nkx3-2P97503 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm20495-201ENSMUST00000173902 235 ntBASIC10.65□□□□□ -0.7
Nkx3-2P97503 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm18558-201ENSMUST00000186253 1214 ntBASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm19087-201ENSMUST00000191430 946 ntBASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm38210-201ENSMUST00000191944 809 ntBASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm43830-201ENSMUST00000198760 1067 ntBASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.65□□□□□ -0.7
Nkx3-2P97503 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.65□□□□□ -0.7
Nkx3-2P97503 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx3-2P97503 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.65□□□□□ -0.71
Nkx3-2P97503 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx3-2P97503 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.65□□□□□ -0.71
Nkx3-2P97503 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.65□□□□□ -0.71
Nkx3-2P97503 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nkx3-2P97503 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.64□□□□□ -0.71
Nkx3-2P97503 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm24398-201ENSMUST00000157870 109 ntBASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm28324-201ENSMUST00000187913 264 ntBASIC10.64□□□□□ -0.71
Nkx3-2P97503 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm17825-201ENSMUST00000206836 794 ntBASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm5996-201ENSMUST00000211110 718 ntBASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm2594-201ENSMUST00000214774 742 ntBASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx3-2P97503 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms