Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmgb1P63158 Gm6905-201ENSMUST00000205729 511 ntBASIC12.4□□□□□ -0.42
Hmgb1P63158 Ntng1-201ENSMUST00000051253 327 ntBASIC12.4□□□□□ -0.42
Hmgb1P63158 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hmgb1P63158 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgb1P63158 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Hmgb1P63158 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hmgb1P63158 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Hmgb1P63158 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.4□□□□□ -0.43
Hmgb1P63158 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hmgb1P63158 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Hmgb1P63158 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.39□□□□□ -0.43
Hmgb1P63158 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Hmgb1P63158 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hmgb1P63158 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.39□□□□□ -0.43
Hmgb1P63158 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.39□□□□□ -0.43
Hmgb1P63158 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Hmgb1P63158 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm13035-201ENSMUST00000117496 342 ntBASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm7851-201ENSMUST00000117574 323 ntBASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.39□□□□□ -0.43
Hmgb1P63158 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.39□□□□□ -0.43
Hmgb1P63158 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.39□□□□□ -0.43
Hmgb1P63158 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.39□□□□□ -0.43
Hmgb1P63158 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm2260-201ENSMUST00000184965 657 ntBASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm44506-201ENSMUST00000206278 965 ntBASIC12.39□□□□□ -0.43
Hmgb1P63158 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.39□□□□□ -0.43
Hmgb1P63158 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.39□□□□□ -0.43
Hmgb1P63158 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.39□□□□□ -0.43
Hmgb1P63158 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.39□□□□□ -0.43
Hmgb1P63158 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Hmgb1P63158 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgb1P63158 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.38□□□□□ -0.43
Hmgb1P63158 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Gm13809-201ENSMUST00000117921 597 ntBASIC12.38□□□□□ -0.43
Hmgb1P63158 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.38□□□□□ -0.43
Hmgb1P63158 Gm15329-201ENSMUST00000121408 155 ntBASIC12.38□□□□□ -0.43
Hmgb1P63158 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Gm24844-201ENSMUST00000158679 127 ntBASIC12.38□□□□□ -0.43
Hmgb1P63158 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Gm7741-201ENSMUST00000181445 989 ntBASIC12.38□□□□□ -0.43
Hmgb1P63158 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Gm7504-201ENSMUST00000201449 424 ntBASIC12.38□□□□□ -0.43
Hmgb1P63158 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Gm45394-201ENSMUST00000209240 1175 ntBASIC12.38□□□□□ -0.43
Hmgb1P63158 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms