Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Lmo4P61969 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm44740-201ENSMUST00000205603 1614 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.05□□□□□ -0.96
Lmo4P61969 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Lmo4P61969 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC9.04□□□□□ -0.96
Lmo4P61969 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Lmo4P61969 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.04□□□□□ -0.96
Lmo4P61969 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm14274-201ENSMUST00000117182 615 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Gm13039-201ENSMUST00000118638 794 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Gm15036-201ENSMUST00000118880 400 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm25677-201ENSMUST00000174983 72 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.04□□□□□ -0.96
Lmo4P61969 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC9.04□□□□□ -0.96
Lmo4P61969 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm18801-201ENSMUST00000186616 536 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm19918-201ENSMUST00000194858 400 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Lmo4P61969 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm14005-210ENSMUST00000225087 1413 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Nudt18-202ENSMUST00000228554 3619 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Lmo4P61969 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.04□□□□□ -0.96
Lmo4P61969 Gm44241-201ENSMUST00000203230 1662 ntBASIC9.04□□□□□ -0.96
Lmo4P61969 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms