Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pdx1P52946 Gm10179-201ENSMUST00000086233 688 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.08□□□□□ -0.64
Pdx1P52946 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pdx1P52946 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.07□□□□□ -0.64
Pdx1P52946 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.07□□□□□ -0.64
Pdx1P52946 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.07□□□□□ -0.64
Pdx1P52946 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
Pdx1P52946 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.07□□□□□ -0.64
Pdx1P52946 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pdx1P52946 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pdx1P52946 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Pdx1P52946 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.07□□□□□ -0.64
Pdx1P52946 Gm14263-201ENSMUST00000117955 746 ntBASIC11.07□□□□□ -0.64
Pdx1P52946 Gm15131-201ENSMUST00000119124 595 ntBASIC11.07□□□□□ -0.64
Pdx1P52946 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pdx1P52946 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pdx1P52946 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.07□□□□□ -0.64
Pdx1P52946 Gm30946-201ENSMUST00000198288 724 ntBASIC11.07□□□□□ -0.64
Pdx1P52946 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.07□□□□□ -0.64
Pdx1P52946 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Mt1-202ENSMUST00000211807 1085 ntBASIC11.07□□□□□ -0.64
Pdx1P52946 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.07□□□□□ -0.64
Pdx1P52946 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Gm10263-201ENSMUST00000085163 300 ntBASIC11.07□□□□□ -0.64
Pdx1P52946 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Pdx1P52946 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pdx1P52946 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.07□□□□□ -0.64
Pdx1P52946 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pdx1P52946 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.06□□□□□ -0.64
Pdx1P52946 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.06□□□□□ -0.64
Pdx1P52946 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pdx1P52946 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pdx1P52946 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.06□□□□□ -0.64
Pdx1P52946 Gm9133-201ENSMUST00000118289 540 ntBASIC11.06□□□□□ -0.64
Pdx1P52946 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.06□□□□□ -0.64
Pdx1P52946 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pdx1P52946 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.06□□□□□ -0.64
Pdx1P52946 Gm43163-201ENSMUST00000196571 442 ntBASIC11.06□□□□□ -0.64
Pdx1P52946 Gm5599-201ENSMUST00000209602 788 ntBASIC11.06□□□□□ -0.64
Pdx1P52946 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.06□□□□□ -0.64
Pdx1P52946 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.06□□□□□ -0.64
Pdx1P52946 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.06□□□□□ -0.64
Pdx1P52946 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pdx1P52946 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms