Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Rfx3P48381 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Rfx3P48381 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Rfx3P48381 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.15□□□□□ -0.79
Rfx3P48381 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.15□□□□□ -0.79
Rfx3P48381 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.79
Rfx3P48381 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Rfx3P48381 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Rfx3P48381 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Rfx3P48381 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Rfx3P48381 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Rfx3P48381 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Rfx3P48381 Gm13916-201ENSMUST00000117368 628 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Gm13263-201ENSMUST00000121271 838 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.14□□□□□ -0.79
Rfx3P48381 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.14□□□□□ -0.79
Rfx3P48381 Mir5132-201ENSMUST00000175166 71 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Gm10807-201ENSMUST00000177134 795 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.14□□□□□ -0.79
Rfx3P48381 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Rfx3P48381 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.14□□□□□ -0.79
Rfx3P48381 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Nsd1-205ENSMUST00000224693 852 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Gm4978-201ENSMUST00000071565 801 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Rfx3P48381 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Rfx3P48381 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.14□□□□□ -0.79
Rfx3P48381 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Rfx3P48381 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rfx3P48381 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.14□□□□□ -0.79
Rfx3P48381 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.14□□□□□ -0.79
Rfx3P48381 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Rfx3P48381 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.13□□□□□ -0.79
Rfx3P48381 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.13□□□□□ -0.79
Rfx3P48381 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Rfx3P48381 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Rfx3P48381 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Rfx3P48381 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.13□□□□□ -0.79
Rfx3P48381 Gm4909-201ENSMUST00000118749 794 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 Gm24990-201ENSMUST00000157406 323 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Rfx3P48381 Gm18734-201ENSMUST00000172937 808 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Rfx3P48381 Gm43138-201ENSMUST00000199123 708 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 Gm4482-201ENSMUST00000200876 742 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 Gm44008-201ENSMUST00000204345 412 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.13□□□□□ -0.79
Rfx3P48381 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Rfx3P48381 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.13□□□□□ -0.79
Rfx3P48381 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rfx3P48381 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms