Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Mir453-201ENSMUST00000104732 82 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm13351-201ENSMUST00000118087 414 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm13445-201ENSMUST00000121664 307 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm17192-201ENSMUST00000169031 511 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm5599-201ENSMUST00000209602 788 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkx2-6P43688 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.64□□□□□ -0.71
Nkx2-6P43688 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm8111-201ENSMUST00000117659 987 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm22846-201ENSMUST00000157706 270 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm3329-201ENSMUST00000159873 556 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm8723-201ENSMUST00000166076 820 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm8701-201ENSMUST00000169259 874 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm4862-201ENSMUST00000170405 438 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm19246-201ENSMUST00000173599 255 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm24809-201ENSMUST00000175318 271 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm42867-201ENSMUST00000202995 469 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm43912-201ENSMUST00000204352 538 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.63□□□□□ -0.71
Nkx2-6P43688 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkx2-6P43688 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nkx2-6P43688 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms