Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Gm25569-201ENSMUST00000157175 131 ntBASIC12.86□□□□□ -0.35
Vcam1P29533 Gm9507-202ENSMUST00000180157 654 ntBASIC12.86□□□□□ -0.35
Vcam1P29533 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.86□□□□□ -0.35
Vcam1P29533 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.86□□□□□ -0.35
Vcam1P29533 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Vcam1P29533 BC106175-202ENSMUST00000219344 1213 ntBASIC12.86□□□□□ -0.35
Vcam1P29533 Gm40879-201ENSMUST00000220759 612 ntBASIC12.86□□□□□ -0.35
Vcam1P29533 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Vcam1P29533 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Vcam1P29533 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vcam1P29533 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.86□□□□□ -0.35
Vcam1P29533 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vcam1P29533 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.85□□□□□ -0.35
Vcam1P29533 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.85□□□□□ -0.35
Vcam1P29533 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
Vcam1P29533 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.85□□□□□ -0.35
Vcam1P29533 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Gm12943-201ENSMUST00000119616 210 ntBASIC12.85□□□□□ -0.35
Vcam1P29533 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.85□□□□□ -0.35
Vcam1P29533 Gm14113-201ENSMUST00000121399 976 ntBASIC12.85□□□□□ -0.35
Vcam1P29533 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.85□□□□□ -0.35
Vcam1P29533 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vcam1P29533 Gm6677-201ENSMUST00000195100 441 ntBASIC12.85□□□□□ -0.35
Vcam1P29533 Gm7902-201ENSMUST00000198842 947 ntBASIC12.85□□□□□ -0.35
Vcam1P29533 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.85□□□□□ -0.35
Vcam1P29533 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.85□□□□□ -0.35
Vcam1P29533 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.85□□□□□ -0.35
Vcam1P29533 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcam1P29533 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.85□□□□□ -0.35
Vcam1P29533 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vcam1P29533 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.84□□□□□ -0.35
Vcam1P29533 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.84□□□□□ -0.35
Vcam1P29533 Gm12745-201ENSMUST00000121767 214 ntBASIC12.84□□□□□ -0.35
Vcam1P29533 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.84□□□□□ -0.35
Vcam1P29533 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.84□□□□□ -0.35
Vcam1P29533 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Vcam1P29533 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC12.84□□□□□ -0.35
Vcam1P29533 Gm42751-201ENSMUST00000198065 559 ntBASIC12.84□□□□□ -0.35
Vcam1P29533 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.84□□□□□ -0.35
Vcam1P29533 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.84□□□□□ -0.35
Vcam1P29533 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Vcam1P29533 Gm19640-201ENSMUST00000214849 464 ntBASIC12.84□□□□□ -0.35
Vcam1P29533 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.84□□□□□ -0.35
Vcam1P29533 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.84□□□□□ -0.35
Vcam1P29533 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vcam1P29533 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Vcam1P29533 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcam1P29533 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms