Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm15617-201ENSMUST00000118973 771 ntBASIC9.34□□□□□ -0.91
CfdP03953 Gm11783-201ENSMUST00000119549 885 ntBASIC9.34□□□□□ -0.91
CfdP03953 Gm13786-201ENSMUST00000122371 333 ntBASIC9.34□□□□□ -0.91
CfdP03953 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.34□□□□□ -0.91
CfdP03953 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.34□□□□□ -0.91
CfdP03953 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Gm25226-201ENSMUST00000158198 123 ntBASIC9.34□□□□□ -0.91
CfdP03953 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Gm26956-201ENSMUST00000182176 986 ntBASIC9.34□□□□□ -0.91
CfdP03953 Gm42867-201ENSMUST00000202995 469 ntBASIC9.34□□□□□ -0.91
CfdP03953 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.34□□□□□ -0.91
CfdP03953 Gm45113-201ENSMUST00000207518 165 ntBASIC9.34□□□□□ -0.91
CfdP03953 Gm4978-201ENSMUST00000071565 801 ntBASIC9.34□□□□□ -0.91
CfdP03953 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
CfdP03953 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CfdP03953 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
CfdP03953 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.33□□□□□ -0.92
CfdP03953 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
CfdP03953 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.33□□□□□ -0.92
CfdP03953 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
CfdP03953 Olfml3-204ENSMUST00000169286 874 ntBASIC9.33□□□□□ -0.92
CfdP03953 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.33□□□□□ -0.92
CfdP03953 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.33□□□□□ -0.92
CfdP03953 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.33□□□□□ -0.92
CfdP03953 Gm45784-201ENSMUST00000188360 142 ntBASIC9.33□□□□□ -0.92
CfdP03953 Gm30285-201ENSMUST00000214614 422 ntBASIC9.33□□□□□ -0.92
CfdP03953 Gm19309-201ENSMUST00000218295 205 ntBASIC9.33□□□□□ -0.92
CfdP03953 Gm6722-201ENSMUST00000221586 390 ntBASIC9.33□□□□□ -0.92
CfdP03953 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.33□□□□□ -0.92
CfdP03953 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
CfdP03953 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
CfdP03953 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
CfdP03953 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CfdP03953 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CfdP03953 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CfdP03953 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CfdP03953 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CfdP03953 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.32□□□□□ -0.92
CfdP03953 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CfdP03953 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
CfdP03953 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CfdP03953 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CfdP03953 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.32□□□□□ -0.92
CfdP03953 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.32□□□□□ -0.92
CfdP03953 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.32□□□□□ -0.92
CfdP03953 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.32□□□□□ -0.92
CfdP03953 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CfdP03953 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.32□□□□□ -0.92
CfdP03953 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CfdP03953 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CfdP03953 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.32□□□□□ -0.92
CfdP03953 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms