Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.54□□□□□ -0.56
CopeO89079 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CopeO89079 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.54□□□□□ -0.56
CopeO89079 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.54□□□□□ -0.56
CopeO89079 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CopeO89079 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CopeO89079 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CopeO89079 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.54□□□□□ -0.56
CopeO89079 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.54□□□□□ -0.56
CopeO89079 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CopeO89079 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CopeO89079 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CopeO89079 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CopeO89079 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CopeO89079 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CopeO89079 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Gm14724-201ENSMUST00000118400 537 ntBASIC11.53□□□□□ -0.56
CopeO89079 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.53□□□□□ -0.56
CopeO89079 Mir1896-201ENSMUST00000122641 81 ntBASIC11.53□□□□□ -0.56
CopeO89079 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
CopeO89079 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.53□□□□□ -0.56
CopeO89079 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Gm24074-201ENSMUST00000158178 260 ntBASIC11.53□□□□□ -0.56
CopeO89079 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.53□□□□□ -0.56
CopeO89079 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CopeO89079 Gm16505-201ENSMUST00000179981 232 ntBASIC11.53□□□□□ -0.56
CopeO89079 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.53□□□□□ -0.56
CopeO89079 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Gm37666-201ENSMUST00000194110 866 ntBASIC11.53□□□□□ -0.56
CopeO89079 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.53□□□□□ -0.56
CopeO89079 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.53□□□□□ -0.56
CopeO89079 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
CopeO89079 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CopeO89079 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CopeO89079 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CopeO89079 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CopeO89079 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CopeO89079 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CopeO89079 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
CopeO89079 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CopeO89079 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CopeO89079 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CopeO89079 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.52□□□□□ -0.57
CopeO89079 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.52□□□□□ -0.57
CopeO89079 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
CopeO89079 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CopeO89079 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.52□□□□□ -0.57
CopeO89079 Gm12380-201ENSMUST00000119012 544 ntBASIC11.52□□□□□ -0.57
CopeO89079 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.52□□□□□ -0.57
CopeO89079 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CopeO89079 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.52□□□□□ -0.57
CopeO89079 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
CopeO89079 Gm2965-201ENSMUST00000198365 343 ntBASIC11.52□□□□□ -0.57
CopeO89079 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.52□□□□□ -0.57
CopeO89079 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.52□□□□□ -0.57
CopeO89079 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.52□□□□□ -0.57
CopeO89079 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.52□□□□□ -0.57
CopeO89079 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.52□□□□□ -0.57
CopeO89079 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CopeO89079 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CopeO89079 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms