Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afb2S4R1M3 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm23272-201ENSMUST00000104053 129 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm15528-201ENSMUST00000117821 864 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm12566-201ENSMUST00000121479 359 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm24992-201ENSMUST00000157412 130 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm21092-201ENSMUST00000178995 955 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm37466-201ENSMUST00000195692 652 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm5468-202ENSMUST00000227851 682 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Gm23105-201ENSMUST00000083719 134 ntBASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afb2S4R1M3 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 BC043934-202ENSMUST00000185694 2356 ntBASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb2S4R1M3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Gm15573-201ENSMUST00000119487 540 ntBASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Gm14395-201ENSMUST00000120494 563 ntBASIC11.2□□□□□ -0.62
H2afb2S4R1M3 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb2S4R1M3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms