Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Gm8226-201ENSMUST00000190511 798 ntBASIC13.13□□□□□ -0.31
Scn11aQ9R053 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC13.13□□□□□ -0.31
Scn11aQ9R053 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 AC134860.2-201ENSMUST00000225277 1036 ntBASIC13.13□□□□□ -0.31
Scn11aQ9R053 AC154477.1-201ENSMUST00000226515 773 ntBASIC13.13□□□□□ -0.31
Scn11aQ9R053 AC137842.2-201ENSMUST00000227734 797 ntBASIC13.13□□□□□ -0.31
Scn11aQ9R053 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Scn11aQ9R053 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gm18256-201ENSMUST00000209087 907 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 AC117769.1-201ENSMUST00000224716 1120 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gm8152-201ENSMUST00000120842 637 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gm37860-201ENSMUST00000195380 1034 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Ighv1-70-201ENSMUST00000196509 351 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Gm26782-203ENSMUST00000227103 751 ntBASIC13.12□□□□□ -0.31
Scn11aQ9R053 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn11aQ9R053 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC13.11□□□□□ -0.31
Scn11aQ9R053 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Gm28624-201ENSMUST00000186430 2131 ntBASIC13.11□□□□□ -0.31
Scn11aQ9R053 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Gm45165-201ENSMUST00000207763 1631 ntBASIC13.11□□□□□ -0.31
Scn11aQ9R053 Gm23062-201ENSMUST00000102349 110 ntBASIC13.11□□□□□ -0.31
Scn11aQ9R053 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Gm11736-201ENSMUST00000121468 505 ntBASIC13.11□□□□□ -0.31
Scn11aQ9R053 AA623943-201ENSMUST00000121794 354 ntBASIC13.11□□□□□ -0.31
Scn11aQ9R053 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC13.11□□□□□ -0.31
Scn11aQ9R053 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms