Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Gm15617-201ENSMUST00000118973 771 ntBASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Gm3329-201ENSMUST00000159873 556 ntBASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rrp8Q9DB85 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm13039-201ENSMUST00000118638 794 ntBASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm12906-201ENSMUST00000154610 441 ntBASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm25604-201ENSMUST00000158359 133 ntBASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.03□□□□□ -0.64
Rrp8Q9DB85 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rrp8Q9DB85 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.02□□□□□ -0.64
Rrp8Q9DB85 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Rrp8Q9DB85 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms