Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3a3Q9D554 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sf3a3Q9D554 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Sf3a3Q9D554 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sf3a3Q9D554 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sf3a3Q9D554 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Sf3a3Q9D554 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sf3a3Q9D554 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.27□□□□□ -0.6
Sf3a3Q9D554 Evc-203ENSMUST00000114154 3695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sf3a3Q9D554 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sf3a3Q9D554 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.27□□□□□ -0.6
Sf3a3Q9D554 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.27□□□□□ -0.6
Sf3a3Q9D554 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Gm6023-201ENSMUST00000118217 606 ntBASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Gm16379-201ENSMUST00000161469 348 ntBASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Gm8762-201ENSMUST00000193486 339 ntBASIC11.27□□□□□ -0.61
Sf3a3Q9D554 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.27□□□□□ -0.61
Sf3a3Q9D554 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Snora73a-201ENSMUST00000082453 205 ntBASIC11.27□□□□□ -0.61
Sf3a3Q9D554 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.27□□□□□ -0.61
Sf3a3Q9D554 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm28937-201ENSMUST00000185413 695 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm29400-201ENSMUST00000187208 695 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm28662-201ENSMUST00000188446 695 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm28251-201ENSMUST00000188835 695 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm37318-201ENSMUST00000194325 695 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm38017-201ENSMUST00000194768 695 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm37287-201ENSMUST00000195449 695 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm37793-201ENSMUST00000195548 695 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sf3a3Q9D554 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms