Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Snord17-201ENSMUST00000104526 238 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gm8111-201ENSMUST00000117659 987 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gm20614-201ENSMUST00000177106 632 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gm43058-201ENSMUST00000197645 625 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gm5363-201ENSMUST00000211927 938 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gm19208-201ENSMUST00000213861 912 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Ginm1-202ENSMUST00000065124 300 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Olfr584-201ENSMUST00000098210 964 ntBASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim11Q99PQ2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.8□□□□□ -0.36
Trim11Q99PQ2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm7666-201ENSMUST00000146631 819 ntBASIC12.8□□□□□ -0.36
Trim11Q99PQ2 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm25732-201ENSMUST00000175168 60 ntBASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm18056-201ENSMUST00000207670 568 ntBASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm18061-201ENSMUST00000208350 562 ntBASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm18063-201ENSMUST00000208529 568 ntBASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm18052-201ENSMUST00000208750 559 ntBASIC12.8□□□□□ -0.36
Trim11Q99PQ2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim11Q99PQ2 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim11Q99PQ2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms