Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Gm2517-201ENSMUST00000215651 348 ntBASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cchcr1Q8K2I2 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cchcr1Q8K2I2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
Cchcr1Q8K2I2 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cchcr1Q8K2I2 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cchcr1Q8K2I2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Cchcr1Q8K2I2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cchcr1Q8K2I2 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC13.27□□□□□ -0.28
Cchcr1Q8K2I2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm43186-201ENSMUST00000198130 824 ntBASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm43937-201ENSMUST00000204640 3122 ntBASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gm38271-201ENSMUST00000192296 1603 ntBASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 AC125409.1-201ENSMUST00000223213 3370 ntBASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cchcr1Q8K2I2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm8111-201ENSMUST00000117659 987 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm16219-201ENSMUST00000120096 274 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm27341-201ENSMUST00000183570 106 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm37284-201ENSMUST00000193607 539 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm8574-201ENSMUST00000203207 924 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cchcr1Q8K2I2 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cchcr1Q8K2I2 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cchcr1Q8K2I2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cchcr1Q8K2I2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cchcr1Q8K2I2 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cchcr1Q8K2I2 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms