Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Gm25076-201ENSMUST00000104098 132 ntBASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Gm43916-201ENSMUST00000205062 967 ntBASIC11.57□□□□□ -0.56
Trub1Q8C0D0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm13611-201ENSMUST00000118269 318 ntBASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm11331-201ENSMUST00000119764 288 ntBASIC11.56□□□□□ -0.56
Trub1Q8C0D0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm37826-201ENSMUST00000195329 322 ntBASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm43378-201ENSMUST00000199336 582 ntBASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm5302-201ENSMUST00000202130 796 ntBASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm45398-201ENSMUST00000210561 165 ntBASIC11.56□□□□□ -0.56
Trub1Q8C0D0 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trub1Q8C0D0 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trub1Q8C0D0 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm13422-201ENSMUST00000118834 504 ntBASIC11.55□□□□□ -0.56
Trub1Q8C0D0 Gm13408-201ENSMUST00000119822 798 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms