Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm45206-201ENSMUST00000206885 2285 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm12397-201ENSMUST00000117674 615 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm13688-201ENSMUST00000121557 608 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm6425-201ENSMUST00000136332 790 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm20091-201ENSMUST00000179683 189 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm18122-201ENSMUST00000211390 904 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm9701-201ENSMUST00000077976 427 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Gm14231-201ENSMUST00000120090 592 ntBASIC15.69■□□□□ 0.1
Usp54Q8BL06 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Usp54Q8BL06 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC15.69■□□□□ 0.1
Usp54Q8BL06 Gm5311-201ENSMUST00000203518 709 ntBASIC15.69■□□□□ 0.1
Usp54Q8BL06 Gm44540-201ENSMUST00000205640 354 ntBASIC15.69■□□□□ 0.1
Usp54Q8BL06 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Gm45893-201ENSMUST00000211899 247 ntBASIC15.69■□□□□ 0.1
Usp54Q8BL06 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Gm5424-201ENSMUST00000053865 1240 ntBASIC15.69■□□□□ 0.1
Usp54Q8BL06 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp54Q8BL06 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Gm13281-201ENSMUST00000120871 567 ntBASIC15.68■□□□□ 0.1
Usp54Q8BL06 Gm6517-201ENSMUST00000121056 511 ntBASIC15.68■□□□□ 0.1
Usp54Q8BL06 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Gm16228-201ENSMUST00000162286 809 ntBASIC15.68■□□□□ 0.1
Usp54Q8BL06 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Gm5801-201ENSMUST00000182247 780 ntBASIC15.68■□□□□ 0.1
Usp54Q8BL06 Gm42710-201ENSMUST00000200608 985 ntBASIC15.68■□□□□ 0.1
Usp54Q8BL06 Gm44388-201ENSMUST00000204350 258 ntBASIC15.68■□□□□ 0.1
Usp54Q8BL06 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC15.68■□□□□ 0.1
Usp54Q8BL06 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Gm22341-201ENSMUST00000083775 129 ntBASIC15.68■□□□□ 0.1
Usp54Q8BL06 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp54Q8BL06 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Usp54Q8BL06 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp54Q8BL06 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp54Q8BL06 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms