Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Gm22495-201ENSMUST00000104492 126 ntBASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Wbp1-209ENSMUST00000205023 716 ntBASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Gm45481-201ENSMUST00000209717 877 ntBASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Pck2-205ENSMUST00000226352 2784 ntBASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Btrc-209ENSMUST00000224478 2194 ntBASIC12.79□□□□□ -0.36
Ddx55Q6ZPL9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Gm24933-201ENSMUST00000103762 110 ntBASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Gm23252-201ENSMUST00000103776 110 ntBASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Gm26443-201ENSMUST00000179610 110 ntBASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Gm18123-201ENSMUST00000210874 822 ntBASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ddx55Q6ZPL9 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx55Q6ZPL9 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Gm8601-201ENSMUST00000182096 909 ntBASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Gm7765-201ENSMUST00000182585 974 ntBASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Gm6644-201ENSMUST00000186507 951 ntBASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Gm2345-201ENSMUST00000193451 589 ntBASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx55Q6ZPL9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms