Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm15515-201ENSMUST00000117827 822 ntBASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm24990-201ENSMUST00000157406 323 ntBASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm7741-201ENSMUST00000181445 989 ntBASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rad54bQ6PFE3 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gm14592-201ENSMUST00000117201 560 ntBASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gm12266-201ENSMUST00000120311 962 ntBASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gm15566-201ENSMUST00000121130 590 ntBASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gm17040-202ENSMUST00000170597 889 ntBASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gm29067-201ENSMUST00000190821 470 ntBASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rad54bQ6PFE3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms