Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Gm44420-201ENSMUST00000203669 490 ntBASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 CT010505.2-201ENSMUST00000227918 998 ntBASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup98Q6PFD9 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Gm23675-201ENSMUST00000157311 125 ntBASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Wbp1-209ENSMUST00000205023 716 ntBASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Gm9619-201ENSMUST00000211587 762 ntBASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Gm6331-201ENSMUST00000217890 450 ntBASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Gm12716-201ENSMUST00000120606 1354 ntBASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nup98Q6PFD9 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Gm8234-201ENSMUST00000198523 1107 ntBASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 AC101205.2-201ENSMUST00000226206 715 ntBASIC13.02□□□□□ -0.33
Nup98Q6PFD9 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Gm10238-201ENSMUST00000089689 408 ntBASIC13.02□□□□□ -0.33
Nup98Q6PFD9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm5472-201ENSMUST00000178604 1678 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm5159-201ENSMUST00000212733 1652 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm16209-201ENSMUST00000118457 627 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm11544-201ENSMUST00000120215 382 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm6238-201ENSMUST00000120999 465 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm10171-201ENSMUST00000126220 628 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm7445-201ENSMUST00000192115 340 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm18555-201ENSMUST00000197935 584 ntBASIC13.01□□□□□ -0.33
Nup98Q6PFD9 Gm7939-201ENSMUST00000201233 1050 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms