Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm7504-201ENSMUST00000201449 424 ntBASIC12.4□□□□□ -0.42
Ift88Q61371 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.4□□□□□ -0.42
Ift88Q61371 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.4□□□□□ -0.42
Ift88Q61371 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Gm18730-201ENSMUST00000218038 343 ntBASIC12.4□□□□□ -0.42
Ift88Q61371 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.4□□□□□ -0.42
Ift88Q61371 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.4□□□□□ -0.42
Ift88Q61371 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Gm8385-201ENSMUST00000058999 643 ntBASIC12.4□□□□□ -0.42
Ift88Q61371 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.4□□□□□ -0.42
Ift88Q61371 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ift88Q61371 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ift88Q61371 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.4□□□□□ -0.42
Ift88Q61371 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ift88Q61371 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ift88Q61371 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.39□□□□□ -0.43
Ift88Q61371 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.39□□□□□ -0.43
Ift88Q61371 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.39□□□□□ -0.43
Ift88Q61371 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ift88Q61371 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.39□□□□□ -0.43
Ift88Q61371 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ift88Q61371 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
Ift88Q61371 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Gm12501-201ENSMUST00000119163 529 ntBASIC12.39□□□□□ -0.43
Ift88Q61371 Gm15549-201ENSMUST00000121595 622 ntBASIC12.39□□□□□ -0.43
Ift88Q61371 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.39□□□□□ -0.43
Ift88Q61371 Gm23085-201ENSMUST00000157849 293 ntBASIC12.39□□□□□ -0.43
Ift88Q61371 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ift88Q61371 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Ift88Q61371 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.39□□□□□ -0.43
Ift88Q61371 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.39□□□□□ -0.43
Ift88Q61371 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.39□□□□□ -0.43
Ift88Q61371 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.39□□□□□ -0.43
Ift88Q61371 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Gm21811-201ENSMUST00000096485 930 ntBASIC12.39□□□□□ -0.43
Ift88Q61371 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ift88Q61371 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ift88Q61371 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.39□□□□□ -0.43
Ift88Q61371 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.39□□□□□ -0.43
Ift88Q61371 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ift88Q61371 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ift88Q61371 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ift88Q61371 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ift88Q61371 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ift88Q61371 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ift88Q61371 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ift88Q61371 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
Ift88Q61371 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.38□□□□□ -0.43
Ift88Q61371 Gm24074-201ENSMUST00000158178 260 ntBASIC12.38□□□□□ -0.43
Ift88Q61371 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ift88Q61371 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ift88Q61371 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.38□□□□□ -0.43
Ift88Q61371 Gm29499-201ENSMUST00000189151 486 ntBASIC12.38□□□□□ -0.43
Ift88Q61371 Gm28329-201ENSMUST00000191208 689 ntBASIC12.38□□□□□ -0.43
Ift88Q61371 Gm29171-201ENSMUST00000191397 486 ntBASIC12.38□□□□□ -0.43
Ift88Q61371 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.38□□□□□ -0.43
Ift88Q61371 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ift88Q61371 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.38□□□□□ -0.43
Ift88Q61371 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.38□□□□□ -0.43
Ift88Q61371 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ift88Q61371 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms