Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Gm8873-201ENSMUST00000217847 1439 ntBASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b2Q3UJB0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm6238-201ENSMUST00000120999 465 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm8707-201ENSMUST00000183325 980 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm37597-201ENSMUST00000191853 382 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm5738-201ENSMUST00000206016 779 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 CT010505.2-201ENSMUST00000227918 998 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm5292-201ENSMUST00000073317 580 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm8725-201ENSMUST00000221829 1333 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Gm42858-201ENSMUST00000202512 1704 ntBASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b2Q3UJB0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Gm13505-201ENSMUST00000121666 817 ntBASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Gm15258-201ENSMUST00000153801 741 ntBASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Gm5040-201ENSMUST00000218609 800 ntBASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b2Q3UJB0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b2Q3UJB0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms