Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm14993-201ENSMUST00000121180 164 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm15549-201ENSMUST00000121595 622 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.44□□□□□ -0.58
Ebf1Q07802 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.44□□□□□ -0.58
Ebf1Q07802 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm18201-201ENSMUST00000174735 875 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm43912-201ENSMUST00000204352 538 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Ebf1Q07802 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.44□□□□□ -0.58
Ebf1Q07802 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ebf1Q07802 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ebf1Q07802 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Gm11979-201ENSMUST00000119629 743 ntBASIC11.43□□□□□ -0.58
Ebf1Q07802 Gm15329-201ENSMUST00000121408 155 ntBASIC11.43□□□□□ -0.58
Ebf1Q07802 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Gm22846-201ENSMUST00000157706 270 ntBASIC11.43□□□□□ -0.58
Ebf1Q07802 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.43□□□□□ -0.58
Ebf1Q07802 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.43□□□□□ -0.58
Ebf1Q07802 Gm43671-201ENSMUST00000200422 433 ntBASIC11.43□□□□□ -0.58
Ebf1Q07802 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ebf1Q07802 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.43□□□□□ -0.58
Ebf1Q07802 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.43□□□□□ -0.58
Ebf1Q07802 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.43□□□□□ -0.58
Ebf1Q07802 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Ebf1Q07802 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf1Q07802 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.42□□□□□ -0.58
Ebf1Q07802 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.42□□□□□ -0.58
Ebf1Q07802 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ebf1Q07802 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms