Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm28196-201ENSMUST00000187719 640 ntBASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm37905-201ENSMUST00000195310 341 ntBASIC10.68□□□□□ -0.7
Nkx3-2P97503 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.68□□□□□ -0.7
Nkx3-2P97503 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.68□□□□□ -0.7
Nkx3-2P97503 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.68□□□□□ -0.7
Nkx3-2P97503 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.68□□□□□ -0.7
Nkx3-2P97503 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.68□□□□□ -0.7
Nkx3-2P97503 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx3-2P97503 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Gm15782-201ENSMUST00000121073 445 ntBASIC10.67□□□□□ -0.7
Nkx3-2P97503 Gm13182-201ENSMUST00000122241 312 ntBASIC10.67□□□□□ -0.7
Nkx3-2P97503 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Mir1956-201ENSMUST00000157748 65 ntBASIC10.67□□□□□ -0.7
Nkx3-2P97503 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Gm7504-201ENSMUST00000201449 424 ntBASIC10.67□□□□□ -0.7
Nkx3-2P97503 Gm42657-201ENSMUST00000201746 211 ntBASIC10.67□□□□□ -0.7
Nkx3-2P97503 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Gm19009-201ENSMUST00000223072 823 ntBASIC10.67□□□□□ -0.7
Nkx3-2P97503 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.67□□□□□ -0.7
Nkx3-2P97503 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Gm25007-201ENSMUST00000083808 133 ntBASIC10.67□□□□□ -0.7
Nkx3-2P97503 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx3-2P97503 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.67□□□□□ -0.7
Nkx3-2P97503 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Gm14892-201ENSMUST00000117636 267 ntBASIC10.66□□□□□ -0.7
Nkx3-2P97503 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Nkx3-2P97503 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms