Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 AC121574.1-201ENSMUST00000228770 3132 ntBASIC10.14□□□□□ -0.79
Lsm3P62311 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.14□□□□□ -0.79
Lsm3P62311 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.14□□□□□ -0.79
Lsm3P62311 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.14□□□□□ -0.79
Lsm3P62311 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.14□□□□□ -0.79
Lsm3P62311 Gm11918-201ENSMUST00000121660 179 ntBASIC10.14□□□□□ -0.79
Lsm3P62311 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.14□□□□□ -0.79
Lsm3P62311 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.14□□□□□ -0.79
Lsm3P62311 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Lsm3P62311 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.14□□□□□ -0.79
Lsm3P62311 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.14□□□□□ -0.79
Lsm3P62311 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.14□□□□□ -0.79
Lsm3P62311 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Lsm3P62311 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lsm3P62311 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Lsm3P62311 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC10.13□□□□□ -0.79
Lsm3P62311 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Lsm3P62311 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Lsm3P62311 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Lsm3P62311 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Lsm3P62311 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.13□□□□□ -0.79
Lsm3P62311 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.13□□□□□ -0.79
Lsm3P62311 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.13□□□□□ -0.79
Lsm3P62311 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.13□□□□□ -0.79
Lsm3P62311 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.13□□□□□ -0.79
Lsm3P62311 Gm27486-201ENSMUST00000184923 80 ntBASIC10.13□□□□□ -0.79
Lsm3P62311 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.13□□□□□ -0.79
Lsm3P62311 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.13□□□□□ -0.79
Lsm3P62311 Gm17794-201ENSMUST00000220252 955 ntBASIC10.13□□□□□ -0.79
Lsm3P62311 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.13□□□□□ -0.79
Lsm3P62311 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.13□□□□□ -0.79
Lsm3P62311 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Lsm3P62311 Gm6091-201ENSMUST00000098307 165 ntBASIC10.13□□□□□ -0.79
Lsm3P62311 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lsm3P62311 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms