Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.1□□□□□ -0.63
Pdx1P52946 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.1□□□□□ -0.63
Pdx1P52946 Gm44126-201ENSMUST00000204831 514 ntBASIC11.1□□□□□ -0.63
Pdx1P52946 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.1□□□□□ -0.63
Pdx1P52946 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.1□□□□□ -0.63
Pdx1P52946 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.1□□□□□ -0.63
Pdx1P52946 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Pdx1P52946 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pdx1P52946 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pdx1P52946 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.1□□□□□ -0.63
Pdx1P52946 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pdx1P52946 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.09□□□□□ -0.63
Pdx1P52946 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pdx1P52946 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Pdx1P52946 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pdx1P52946 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pdx1P52946 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.09□□□□□ -0.63
Pdx1P52946 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pdx1P52946 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Pdx1P52946 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.09□□□□□ -0.63
Pdx1P52946 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.09□□□□□ -0.63
Pdx1P52946 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.09□□□□□ -0.63
Pdx1P52946 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Pdx1P52946 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Gm8302-201ENSMUST00000119217 852 ntBASIC11.09□□□□□ -0.63
Pdx1P52946 Gm12029-201ENSMUST00000120073 832 ntBASIC11.09□□□□□ -0.63
Pdx1P52946 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.09□□□□□ -0.63
Pdx1P52946 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.09□□□□□ -0.63
Pdx1P52946 Gm44323-201ENSMUST00000198689 129 ntBASIC11.09□□□□□ -0.63
Pdx1P52946 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.09□□□□□ -0.63
Pdx1P52946 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.09□□□□□ -0.63
Pdx1P52946 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.09□□□□□ -0.63
Pdx1P52946 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.09□□□□□ -0.63
Pdx1P52946 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pdx1P52946 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pdx1P52946 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pdx1P52946 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Pdx1P52946 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.09□□□□□ -0.63
Pdx1P52946 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pdx1P52946 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pdx1P52946 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Pdx1P52946 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pdx1P52946 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Pdx1P52946 Gm12616-201ENSMUST00000118594 382 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.08□□□□□ -0.64
Pdx1P52946 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.08□□□□□ -0.64
Pdx1P52946 Gm22334-201ENSMUST00000158070 133 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.08□□□□□ -0.64
Pdx1P52946 Gm12624-201ENSMUST00000177615 382 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Gm12621-201ENSMUST00000177760 382 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Gm12615-201ENSMUST00000177970 382 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Gm12622-201ENSMUST00000177975 382 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Gm12627-201ENSMUST00000178412 382 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Gm12625-201ENSMUST00000179122 382 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Gm12614-201ENSMUST00000179586 382 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pdx1P52946 Gm12613-201ENSMUST00000180323 382 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Gm7467-201ENSMUST00000185173 652 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Gm44329-201ENSMUST00000197469 112 ntBASIC11.08□□□□□ -0.64
Pdx1P52946 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pdx1P52946 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms