Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Shmt1P50431 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Shmt1P50431 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Shmt1P50431 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.87□□□□□ -0.51
Shmt1P50431 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.87□□□□□ -0.51
Shmt1P50431 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Gm12030-201ENSMUST00000121917 223 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Gm6407-201ENSMUST00000176468 549 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.87□□□□□ -0.51
Shmt1P50431 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.87□□□□□ -0.51
Shmt1P50431 Gm19091-201ENSMUST00000208120 978 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Gm9139-201ENSMUST00000218817 700 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.87□□□□□ -0.51
Shmt1P50431 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Shmt1P50431 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Gm25517-201ENSMUST00000083865 134 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Shmt1P50431 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.87□□□□□ -0.51
Shmt1P50431 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.87□□□□□ -0.51
Shmt1P50431 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.87□□□□□ -0.51
Shmt1P50431 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt1P50431 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.86□□□□□ -0.51
Shmt1P50431 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Gm12463-201ENSMUST00000118271 849 ntBASIC11.86□□□□□ -0.51
Shmt1P50431 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.86□□□□□ -0.51
Shmt1P50431 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.86□□□□□ -0.51
Shmt1P50431 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.86□□□□□ -0.51
Shmt1P50431 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.86□□□□□ -0.51
Shmt1P50431 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.86□□□□□ -0.51
Shmt1P50431 Gm9369-201ENSMUST00000196009 733 ntBASIC11.86□□□□□ -0.51
Shmt1P50431 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.86□□□□□ -0.51
Shmt1P50431 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Shmt1P50431 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.86□□□□□ -0.51
Shmt1P50431 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.86□□□□□ -0.51
Shmt1P50431 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.86□□□□□ -0.51
Shmt1P50431 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Shmt1P50431 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Shmt1P50431 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Shmt1P50431 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Shmt1P50431 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.86□□□□□ -0.51
Shmt1P50431 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Shmt1P50431 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Shmt1P50431 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.86□□□□□ -0.51
Shmt1P50431 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Shmt1P50431 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Shmt1P50431 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.86□□□□□ -0.51
Shmt1P50431 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.86□□□□□ -0.51
Shmt1P50431 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Shmt1P50431 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt1P50431 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt1P50431 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Shmt1P50431 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt1P50431 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt1P50431 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Shmt1P50431 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt1P50431 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.85□□□□□ -0.51
Shmt1P50431 Gm25063-201ENSMUST00000104666 94 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms