Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC13.39□□□□□ -0.27
Rfx1P48377 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Rfx1P48377 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.39□□□□□ -0.27
Rfx1P48377 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.39□□□□□ -0.27
Rfx1P48377 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Gm27627-201ENSMUST00000183644 150 ntBASIC13.39□□□□□ -0.27
Rfx1P48377 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Gm44967-201ENSMUST00000207047 631 ntBASIC13.39□□□□□ -0.27
Rfx1P48377 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.39□□□□□ -0.27
Rfx1P48377 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC13.39□□□□□ -0.27
Rfx1P48377 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.39□□□□□ -0.27
Rfx1P48377 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rfx1P48377 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.39□□□□□ -0.27
Rfx1P48377 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.39□□□□□ -0.27
Rfx1P48377 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Rfx1P48377 Hyal2-206ENSMUST00000195681 2968 ntBASIC13.39□□□□□ -0.27
Rfx1P48377 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Rfx1P48377 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Rfx1P48377 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rfx1P48377 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rfx1P48377 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rfx1P48377 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rfx1P48377 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rfx1P48377 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rfx1P48377 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfx1P48377 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfx1P48377 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Rfx1P48377 Gm29615-201ENSMUST00000185371 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm28224-201ENSMUST00000186078 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm29001-201ENSMUST00000186177 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm28292-201ENSMUST00000186593 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm28101-201ENSMUST00000187608 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm29076-201ENSMUST00000187689 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm28302-201ENSMUST00000187931 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfx1P48377 Gm28646-201ENSMUST00000188220 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm28205-201ENSMUST00000189177 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm29032-201ENSMUST00000189797 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm28695-201ENSMUST00000190300 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Gm37448-201ENSMUST00000192795 697 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm38151-201ENSMUST00000195085 289 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 AY036118-201ENSMUST00000200021 923 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfx1P48377 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.38□□□□□ -0.27
Rfx1P48377 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfx1P48377 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfx1P48377 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.38□□□□□ -0.27
Rfx1P48377 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC13.37□□□□□ -0.27
Rfx1P48377 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rfx1P48377 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Rfx1P48377 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rfx1P48377 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC13.37□□□□□ -0.27
Rfx1P48377 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfx1P48377 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rfx1P48377 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms