Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Gm12481-201ENSMUST00000102482 297 ntBASIC16.47■□□□□ 0.23
Chd1P40201 Gm13217-201ENSMUST00000120466 953 ntBASIC16.47■□□□□ 0.23
Chd1P40201 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chd1P40201 Gm25426-201ENSMUST00000157606 170 ntBASIC16.47■□□□□ 0.23
Chd1P40201 Gm16301-201ENSMUST00000161959 295 ntBASIC16.47■□□□□ 0.23
Chd1P40201 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Chd1P40201 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC16.47■□□□□ 0.23
Chd1P40201 Gm8918-201ENSMUST00000190587 1087 ntBASIC16.47■□□□□ 0.23
Chd1P40201 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC16.47■□□□□ 0.23
Chd1P40201 Gm18646-201ENSMUST00000212240 1063 ntBASIC16.47■□□□□ 0.23
Chd1P40201 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 AC154643.1-201ENSMUST00000225643 625 ntBASIC16.47■□□□□ 0.23
Chd1P40201 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Chd1P40201 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Chd1P40201 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chd1P40201 Gm26616-202ENSMUST00000195676 3107 ntBASIC16.47■□□□□ 0.23
Chd1P40201 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd1P40201 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Gm18806-201ENSMUST00000207607 1775 ntBASIC16.46■□□□□ 0.23
Chd1P40201 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Chd1P40201 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Gm12904-201ENSMUST00000117451 1399 ntBASIC16.46■□□□□ 0.23
Chd1P40201 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Chd1P40201 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Gm12072-201ENSMUST00000118293 715 ntBASIC16.46■□□□□ 0.23
Chd1P40201 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC16.46■□□□□ 0.23
Chd1P40201 Gm21577-201ENSMUST00000190823 697 ntBASIC16.46■□□□□ 0.23
Chd1P40201 Gm20802-201ENSMUST00000190832 698 ntBASIC16.46■□□□□ 0.23
Chd1P40201 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC16.46■□□□□ 0.23
Chd1P40201 Gm44936-201ENSMUST00000207324 735 ntBASIC16.46■□□□□ 0.23
Chd1P40201 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC16.46■□□□□ 0.23
Chd1P40201 Gm3379-201ENSMUST00000222259 642 ntBASIC16.46■□□□□ 0.23
Chd1P40201 AC163038.2-201ENSMUST00000224851 650 ntBASIC16.46■□□□□ 0.23
Chd1P40201 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Gm22982-201ENSMUST00000082613 319 ntBASIC16.46■□□□□ 0.23
Chd1P40201 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Chd1P40201 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Chd1P40201 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Chd1P40201 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC16.46■□□□□ 0.23
Chd1P40201 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Chd1P40201 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd1P40201 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC16.46■□□□□ 0.23
Chd1P40201 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chd1P40201 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chd1P40201 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.46■□□□□ 0.22
Chd1P40201 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chd1P40201 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.46■□□□□ 0.22
Chd1P40201 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm9075-201ENSMUST00000168738 794 ntBASIC16.45■□□□□ 0.22
Chd1P40201 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm20281-201ENSMUST00000188225 267 ntBASIC16.45■□□□□ 0.22
Chd1P40201 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 AC158519.1-201ENSMUST00000228615 179 ntBASIC16.45■□□□□ 0.22
Chd1P40201 Mir194-2-201ENSMUST00000083648 86 ntBASIC16.45■□□□□ 0.22
Chd1P40201 AC154639.1-201ENSMUST00000224393 2849 ntBASIC16.45■□□□□ 0.22
Chd1P40201 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chd1P40201 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm15383-201ENSMUST00000121889 1443 ntBASIC16.45■□□□□ 0.22
Chd1P40201 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Hsd17b13-203ENSMUST00000120320 1118 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm24597-201ENSMUST00000122503 300 ntBASIC16.45■□□□□ 0.22
Chd1P40201 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd1P40201 Gm4398-201ENSMUST00000182698 992 ntBASIC16.45■□□□□ 0.22
Chd1P40201 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd1P40201 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms