Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nfkb1P25799 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nfkb1P25799 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.59□□□□□ -0.55
Nfkb1P25799 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Nfkb1P25799 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.59□□□□□ -0.55
Nfkb1P25799 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Gm25880-201ENSMUST00000104331 132 ntBASIC11.59□□□□□ -0.55
Nfkb1P25799 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Gm15617-201ENSMUST00000118973 771 ntBASIC11.59□□□□□ -0.55
Nfkb1P25799 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Gm22877-201ENSMUST00000175451 105 ntBASIC11.59□□□□□ -0.55
Nfkb1P25799 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.59□□□□□ -0.55
Nfkb1P25799 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.59□□□□□ -0.55
Nfkb1P25799 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Gm18514-201ENSMUST00000218980 436 ntBASIC11.59□□□□□ -0.55
Nfkb1P25799 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nfkb1P25799 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nfkb1P25799 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.59□□□□□ -0.55
Nfkb1P25799 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.59□□□□□ -0.55
Nfkb1P25799 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nfkb1P25799 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nfkb1P25799 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nfkb1P25799 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nfkb1P25799 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nfkb1P25799 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.58□□□□□ -0.56
Nfkb1P25799 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gm12791-201ENSMUST00000120788 655 ntBASIC11.58□□□□□ -0.56
Nfkb1P25799 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gm23218-201ENSMUST00000158124 276 ntBASIC11.58□□□□□ -0.56
Nfkb1P25799 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nfkb1P25799 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.58□□□□□ -0.56
Nfkb1P25799 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.58□□□□□ -0.56
Nfkb1P25799 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gm43002-201ENSMUST00000200310 155 ntBASIC11.58□□□□□ -0.56
Nfkb1P25799 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nfkb1P25799 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.58□□□□□ -0.56
Nfkb1P25799 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Erich3-203ENSMUST00000189969 3460 ntBASIC11.58□□□□□ -0.56
Nfkb1P25799 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nfkb1P25799 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nfkb1P25799 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nfkb1P25799 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.57□□□□□ -0.56
Nfkb1P25799 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms