Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CopeO89079 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.56□□□□□ -0.56
CopeO89079 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CopeO89079 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Gm13996-201ENSMUST00000118456 430 ntBASIC11.56□□□□□ -0.56
CopeO89079 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.56□□□□□ -0.56
CopeO89079 Gm8566-201ENSMUST00000120174 465 ntBASIC11.56□□□□□ -0.56
CopeO89079 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.56□□□□□ -0.56
CopeO89079 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.56□□□□□ -0.56
CopeO89079 Gm8459-201ENSMUST00000162504 760 ntBASIC11.56□□□□□ -0.56
CopeO89079 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Gm38341-201ENSMUST00000195357 515 ntBASIC11.56□□□□□ -0.56
CopeO89079 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Gm44364-201ENSMUST00000198368 141 ntBASIC11.56□□□□□ -0.56
CopeO89079 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.56□□□□□ -0.56
CopeO89079 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.56□□□□□ -0.56
CopeO89079 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CopeO89079 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CopeO89079 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CopeO89079 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CopeO89079 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.56□□□□□ -0.56
CopeO89079 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CopeO89079 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.55□□□□□ -0.56
CopeO89079 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CopeO89079 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.55□□□□□ -0.56
CopeO89079 Gm23949-201ENSMUST00000104027 127 ntBASIC11.55□□□□□ -0.56
CopeO89079 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.55□□□□□ -0.56
CopeO89079 Mir7085-201ENSMUST00000184353 66 ntBASIC11.55□□□□□ -0.56
CopeO89079 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.55□□□□□ -0.56
CopeO89079 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.55□□□□□ -0.56
CopeO89079 Gm45433-201ENSMUST00000209386 247 ntBASIC11.55□□□□□ -0.56
CopeO89079 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.55□□□□□ -0.56
CopeO89079 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.55□□□□□ -0.56
CopeO89079 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CopeO89079 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CopeO89079 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.54□□□□□ -0.56
CopeO89079 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
CopeO89079 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.54□□□□□ -0.56
CopeO89079 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CopeO89079 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
CopeO89079 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CopeO89079 Gm12247-201ENSMUST00000117585 670 ntBASIC11.54□□□□□ -0.56
CopeO89079 Gm15711-201ENSMUST00000118889 535 ntBASIC11.54□□□□□ -0.56
CopeO89079 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms