Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Gm23439-201ENSMUST00000104292 132 ntBASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Mir1249-201ENSMUST00000116791 98 ntBASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Gm8152-201ENSMUST00000120842 637 ntBASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Gm16288-201ENSMUST00000137940 367 ntBASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Gm24943-201ENSMUST00000158329 433 ntBASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Gm27316-201ENSMUST00000184884 277 ntBASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
B020004C17RikJ3QP07 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Gm13171-201ENSMUST00000117233 391 ntBASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
B020004C17RikJ3QP07 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
B020004C17RikJ3QP07 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms