Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Gm8796-201ENSMUST00000219122 936 ntBASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Hfm1D3Z4R1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Gm26957-201ENSMUST00000182645 977 ntBASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Gm28032-201ENSMUST00000184104 96 ntBASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 AC160929.1-201ENSMUST00000221247 415 ntBASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Gm43172-201ENSMUST00000202139 2137 ntBASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hfm1D3Z4R1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Snora68-201ENSMUST00000104375 131 ntBASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Gm12684-201ENSMUST00000118675 999 ntBASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Mipep-ps-201ENSMUST00000177439 291 ntBASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Gm7539-201ENSMUST00000189789 630 ntBASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Gm7047-201ENSMUST00000196224 1063 ntBASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Gm43727-201ENSMUST00000198021 2647 ntBASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hfm1D3Z4R1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms