Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm12943-201ENSMUST00000119616 210 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm5244-201ENSMUST00000164001 339 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm16288-201ENSMUST00000137940 367 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Mir6923-201ENSMUST00000184592 72 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm7902-201ENSMUST00000198842 947 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scn3aA2ASI5 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm14113-201ENSMUST00000121399 976 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm22344-201ENSMUST00000122642 278 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm10580-201ENSMUST00000097985 396 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm10582-201ENSMUST00000097987 396 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm10583-201ENSMUST00000097988 396 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scn3aA2ASI5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms