Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Gm7150-201ENSMUST00000122032 981 ntBASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.15□□□□□ -0.78
H2afb3S4R1G7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Gm8385-201ENSMUST00000058999 643 ntBASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.15□□□□□ -0.78
H2afb3S4R1G7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb3S4R1G7 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
H2afb3S4R1G7 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
H2afb3S4R1G7 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
H2afb3S4R1G7 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
H2afb3S4R1G7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Gm20495-201ENSMUST00000173902 235 ntBASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Gm16505-201ENSMUST00000179981 232 ntBASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.14□□□□□ -0.79
H2afb3S4R1G7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
H2afb3S4R1G7 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Gm13916-201ENSMUST00000117368 628 ntBASIC10.13□□□□□ -0.79
H2afb3S4R1G7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Gm23085-201ENSMUST00000157849 293 ntBASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Gm26083-201ENSMUST00000157904 193 ntBASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
H2afb3S4R1G7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms