Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm25562-201ENSMUST00000104608 133 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm15403-201ENSMUST00000119343 1227 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm15741-201ENSMUST00000119401 754 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm14908-201ENSMUST00000120930 1286 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm13284-201ENSMUST00000121020 547 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm15196-201ENSMUST00000121406 482 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm9372-201ENSMUST00000168454 430 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm26272-201ENSMUST00000179241 132 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Mir669a-7-201ENSMUST00000180364 87 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC10.88□□□□□ -0.67
SrfQ9JM73 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm34379-201ENSMUST00000195036 290 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Mir669a-6-201ENSMUST00000196127 87 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Mir669a-12-201ENSMUST00000197274 87 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Mir669a-5-201ENSMUST00000197439 87 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Mir669a-10-201ENSMUST00000197745 87 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Mir669a-11-201ENSMUST00000197952 87 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Mir669a-4-201ENSMUST00000198665 87 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Mir669a-9-201ENSMUST00000200087 87 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Mir669a-8-201ENSMUST00000200268 87 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm43997-201ENSMUST00000203986 1005 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm7525-201ENSMUST00000219425 454 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 AC154527.3-201ENSMUST00000225519 989 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 AL589696.1-201ENSMUST00000225711 330 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Zfp850-201ENSMUST00000099111 941 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SrfQ9JM73 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SrfQ9JM73 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.88□□□□□ -0.67
SrfQ9JM73 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
SrfQ9JM73 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Gm42975-201ENSMUST00000200612 1491 ntBASIC10.87□□□□□ -0.67
SrfQ9JM73 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SrfQ9JM73 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
SrfQ9JM73 Gm22594-201ENSMUST00000104251 130 ntBASIC10.87□□□□□ -0.67
SrfQ9JM73 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
SrfQ9JM73 Gm11619-201ENSMUST00000117474 237 ntBASIC10.87□□□□□ -0.67
SrfQ9JM73 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.87□□□□□ -0.67
SrfQ9JM73 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms