Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gm25569-201ENSMUST00000157175 131 ntBASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gm18733-202ENSMUST00000174447 401 ntBASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gm18014-201ENSMUST00000183369 817 ntBASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gm43547-201ENSMUST00000197729 328 ntBASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.36□□□□□ -0.43
Snx29Q9D3S3 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snx29Q9D3S3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm27956-201ENSMUST00000175604 260 ntBASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gm45094-201ENSMUST00000207013 617 ntBASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Snx29Q9D3S3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Snx29Q9D3S3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms