Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm25562-201ENSMUST00000104608 133 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm15003-201ENSMUST00000118884 446 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm14234-201ENSMUST00000119539 845 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm8451-201ENSMUST00000170338 447 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm18201-201ENSMUST00000174735 875 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm5621-201ENSMUST00000187303 640 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm9353-201ENSMUST00000200472 604 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Capsl-202ENSMUST00000226688 739 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm7536-201ENSMUST00000077389 444 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm5453-201ENSMUST00000080866 447 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Erich3-203ENSMUST00000189969 3460 ntBASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Stag1Q9D3E6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm6158-201ENSMUST00000109467 904 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm12663-201ENSMUST00000118481 958 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm14165-201ENSMUST00000121456 952 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm5257-201ENSMUST00000121823 790 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm5700-201ENSMUST00000191483 989 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm42660-201ENSMUST00000197733 947 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Stag1Q9D3E6 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms