Protein–RNA interactions for Protein: Q9D0Z3

Tmem53, Transmembrane protein 53, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem53Q9D0Z3 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem53Q9D0Z3 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm12616-201ENSMUST00000118594 382 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm13263-201ENSMUST00000121271 838 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm22334-201ENSMUST00000158070 133 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm12624-201ENSMUST00000177615 382 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm12621-201ENSMUST00000177760 382 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm4310-201ENSMUST00000177847 889 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm12615-201ENSMUST00000177970 382 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm12622-201ENSMUST00000177975 382 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm12627-201ENSMUST00000178412 382 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm12625-201ENSMUST00000179122 382 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm12614-201ENSMUST00000179586 382 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm12613-201ENSMUST00000180323 382 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm10774-201ENSMUST00000188689 204 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tmem53Q9D0Z3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem53Q9D0Z3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Tmem53Q9D0Z3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Tmem53Q9D0Z3 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem53Q9D0Z3 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Tmem53Q9D0Z3 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem53Q9D0Z3 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Tmem53Q9D0Z3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Tmem53Q9D0Z3 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Gm9550-201ENSMUST00000161130 862 ntBASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Gm38117-201ENSMUST00000194653 939 ntBASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tmem53Q9D0Z3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms