Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Mir6927-201ENSMUST00000184494 71 ntBASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Gm37835-201ENSMUST00000193305 361 ntBASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Gm43852-201ENSMUST00000202098 917 ntBASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Gm2517-201ENSMUST00000215651 348 ntBASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.84□□□□□ -0.35
Trim11Q99PQ2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim11Q99PQ2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim11Q99PQ2 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trim11Q99PQ2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Gm9089-201ENSMUST00000122027 526 ntBASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.83□□□□□ -0.36
Trim11Q99PQ2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim11Q99PQ2 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Gm10774-201ENSMUST00000188689 204 ntBASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Gm8574-201ENSMUST00000203207 924 ntBASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.82□□□□□ -0.36
Trim11Q99PQ2 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim11Q99PQ2 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms