Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha3Q91Y16 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gm6485-201ENSMUST00000160676 439 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gm18367-201ENSMUST00000176139 600 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gm9645-201ENSMUST00000197131 792 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha3Q91Y16 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Gm12463-201ENSMUST00000118271 849 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Gm12029-201ENSMUST00000120073 832 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Gm7504-201ENSMUST00000201449 424 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Gm44980-201ENSMUST00000205826 314 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Gm5996-201ENSMUST00000211110 718 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha3Q91Y16 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 121 ms