Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.64□□□□□ -0.55
Trim60Q8VI40 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.64□□□□□ -0.55
Trim60Q8VI40 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.64□□□□□ -0.55
Trim60Q8VI40 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim60Q8VI40 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.63□□□□□ -0.55
Trim60Q8VI40 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Gm8385-201ENSMUST00000058999 643 ntBASIC11.63□□□□□ -0.55
Trim60Q8VI40 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.63□□□□□ -0.55
Trim60Q8VI40 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.63□□□□□ -0.55
Trim60Q8VI40 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.63□□□□□ -0.55
Trim60Q8VI40 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim60Q8VI40 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.62□□□□□ -0.55
Trim60Q8VI40 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Gm3150-201ENSMUST00000166418 204 ntBASIC11.62□□□□□ -0.55
Trim60Q8VI40 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.62□□□□□ -0.55
Trim60Q8VI40 Gm4482-201ENSMUST00000200876 742 ntBASIC11.62□□□□□ -0.55
Trim60Q8VI40 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Gm5996-201ENSMUST00000211110 718 ntBASIC11.62□□□□□ -0.55
Trim60Q8VI40 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Trim60Q8VI40 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms